Fix SRC_URI for emboss

Package-Manager: portage-2.2.0_alpha69/cvs/Linux x86_64

diff --git a/sci-biology/embassy-cbstools/ChangeLog b/sci-biology/embassy-cbstools/ChangeLog
index 02016e161abb2649648c91b3d99e1697e969e349..8a98140f81ad5f8a4c368ded6c9a4144839c7dff 100644 (file)
--- a/sci-biology/embassy-cbstools/ChangeLog
+++ b/sci-biology/embassy-cbstools/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-cbstools
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/ChangeLog,v 1.6 2011/03/13 12:53:41 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/ChangeLog,v 1.7 2011/10/20 08:56:48 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-cbstools-1.0.0.ebuild, embassy-cbstools-1.0.0-r1.ebuild:
+  Fix SRC_URI for emboss
 
   13 Mar 2011; Raúl Porcel <armin76@gentoo.org> embassy-cbstools-1.0.0.ebuild,
   embassy-cbstools-1.0.0-r1.ebuild:

diff --git a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild
index 70d19e7027369a73e7d08145bd18aed58bf6f241..fbf01d165ae7e92e47ead9487c557d525b0244ef 100644 (file)
--- a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild
+++ b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild,v 1.3 2011/03/13 12:53:42 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild,v 1.4 2011/10/20 08:56:48 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS wrappers for applications from the CBS group"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild
index d94032c4fb4e4063346329d994f5d11c609c4bb4..a68c922ce4e464ee59406cc21a2c6c9dd0cc6e36 100644 (file)
--- a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild
+++ b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild,v 1.3 2011/03/13 12:53:41 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild,v 1.4 2011/10/20 08:56:48 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS wrappers for applications from the CBS group"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-domainatrix/ChangeLog b/sci-biology/embassy-domainatrix/ChangeLog
index 3a44c40f6c5ab15c12e9c56af1f43bd170cb36c3..48d4eb4612e0c9ad2205b369c1674c2cade3f2d2 100644 (file)
--- a/sci-biology/embassy-domainatrix/ChangeLog
+++ b/sci-biology/embassy-domainatrix/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-domainatrix
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/ChangeLog,v 1.31 2011/04/05 06:05:10 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/ChangeLog,v 1.32 2011/10/20 08:57:09 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-domainatrix-0.1.0-r3.ebuild, embassy-domainatrix-0.1.0-r4.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org>
   -embassy-domainatrix-0.1.0-r1.ebuild:

diff --git a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild
index 72683765dd37260d1c2c830ab5e0f4483f350b81..806b2e6c5d87e25cd31df362826caa91ca064c27 100644 (file)
--- a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild
+++ b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:54:09 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:57:09 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="Protein domain analysis add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild
index dd10a71107f375395471ae96206793126def769f..970f98c5c5bf7154fefab10dc23ce75b9fc0cc1a 100644 (file)
--- a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild
+++ b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:54:09 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:57:09 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="Protein domain analysis add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-domalign/ChangeLog b/sci-biology/embassy-domalign/ChangeLog
index 9a4d1ba64cb051d48acb8c8c9f1eeb989b3c8a3f..fd9e262347602ba6db35de3f8f746aab90e63e52 100644 (file)
--- a/sci-biology/embassy-domalign/ChangeLog
+++ b/sci-biology/embassy-domalign/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-domalign
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/ChangeLog,v 1.22 2011/04/05 06:06:01 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/ChangeLog,v 1.23 2011/10/20 08:57:30 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-domalign-0.1.0-r4.ebuild, embassy-domalign-0.1.0-r3.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org>
   -embassy-domalign-0.1.0-r1.ebuild:

diff --git a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild
index 6c9739d790cfc16461a59efe39a17fa985cac692..5126e6f7ee90f905d24c49cc59983c5f76f925c5 100644 (file)
--- a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild
+++ b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:54:37 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:57:30 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="Protein domain alignment add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild
index 2aa9a8e295d6057187ec92616fb2772e8c42bd2f..30c6fe0aa5e2ed9c6c77a144e88d5d39fda7a99e 100644 (file)
--- a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild
+++ b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:54:37 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:57:30 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="Protein domain alignment add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-domsearch/ChangeLog b/sci-biology/embassy-domsearch/ChangeLog
index 56f9dff81f6d207e4bf81a93a13791b612b98f2d..414b8c4df2917fbcaafd09cfc0e0d55527f7fc44 100644 (file)
--- a/sci-biology/embassy-domsearch/ChangeLog
+++ b/sci-biology/embassy-domsearch/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-domsearch
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/ChangeLog,v 1.21 2011/04/05 06:06:38 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/ChangeLog,v 1.22 2011/10/20 08:55:04 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-domsearch-0.1.0-r4.ebuild, embassy-domsearch-0.1.0-r3.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org>
   -embassy-domsearch-0.1.0-r1.ebuild:

diff --git a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild
index 51ac241a77f32a0144ff27f369dac1fd35b691b8..c6a3941672bd6729e8bd59c97fd4534dc0e5d621 100644 (file)
--- a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild
+++ b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:55:05 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:55:04 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="Protein domain search add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild
index d0dd95caca23782a24dd327c4725702c8fefe24a..2915d2ab5fd4b2bd3ba5192d1e41ac3f1d714910 100644 (file)
--- a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild
+++ b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:55:05 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:55:04 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="Protein domain search add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-emnu/ChangeLog b/sci-biology/embassy-emnu/ChangeLog
index 53fdc551f7f05d2c208a42ae554ac33749df77a3..c2462e926bc18d6b450530894f645307210aabbd 100644 (file)
--- a/sci-biology/embassy-emnu/ChangeLog
+++ b/sci-biology/embassy-emnu/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-emnu
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/ChangeLog,v 1.31 2011/04/05 06:06:53 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/ChangeLog,v 1.32 2011/10/20 08:54:43 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-emnu-1.05-r5.ebuild, embassy-emnu-1.05-r6.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-emnu-1.05-r3.ebuild:
   Dropped old, due to unsatisfied deps

diff --git a/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild b/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild
index 7dddedcf47fabaaea7631d98b7f232122807b648..675d6808381784caa67ec1950c246a386d36bb5e 100644 (file)
--- a/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild
+++ b/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild,v 1.3 2011/03/13 12:55:32 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild,v 1.4 2011/10/20 08:54:43 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS Menu is Not UNIX - Simple menu of EMBOSS applications"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild b/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild
index 0b773e9ca284657999e2a1df542cfb7c4ce6b832..ed94730f09c539be8c2d4f44a0ad6231cb53f672 100644 (file)
--- a/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild
+++ b/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild,v 1.3 2011/03/13 12:55:32 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild,v 1.4 2011/10/20 08:54:43 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS Menu is Not UNIX - Simple menu of EMBOSS applications"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-esim4/ChangeLog b/sci-biology/embassy-esim4/ChangeLog
index e6c8b0501c1f81e041f8a2d9f7884a4332facb7b..549d86832d6fff3777a7336c679317af8982b8a0 100644 (file)
--- a/sci-biology/embassy-esim4/ChangeLog
+++ b/sci-biology/embassy-esim4/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-esim4
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.30 2011/04/05 06:07:40 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.31 2011/10/20 08:54:22 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-esim4-1.0.0-r6.ebuild, embassy-esim4-1.0.0-r5.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-esim4-1.0.0-r3.ebuild:
   Dropped old, due to unsatisfied deps

diff --git a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild
index cd49159d4c901d548e77b0cc4fe8ed0d64b749da..e48a6ed6e3d25dd98c92449c9c80993436318904 100644 (file)
--- a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild
+++ b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild,v 1.3 2011/03/13 12:56:00 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild,v 1.4 2011/10/20 08:54:22 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild
index 0c6152c49271bbc8c1dedf5d5dafd98b789b66f4..9e9c0681c4bcd986cb5ad1f5f25281e1d4bcf626 100644 (file)
--- a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild
+++ b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild,v 1.3 2011/03/13 12:56:00 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild,v 1.4 2011/10/20 08:54:22 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-hmmer/ChangeLog b/sci-biology/embassy-hmmer/ChangeLog
index 5c03ed84aeaf628bebf6561f829ed8ed3aa55516..87fd3a15e63b5c55626e3ceed6154582870677e5 100644 (file)
--- a/sci-biology/embassy-hmmer/ChangeLog
+++ b/sci-biology/embassy-hmmer/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-hmmer
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.32 2011/04/05 06:08:57 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.33 2011/10/20 08:54:01 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-hmmer-2.3.2-r3.ebuild, embassy-hmmer-2.3.2-r2.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-hmmer-2.3.2.ebuild:
   Dropped old, due to unsatisfied deps

diff --git a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild
index 87748b6eb9fe604baad8961442751c0ccd5a194b..8e2a2b7bab338e515374f0c88140b9c5bb68a7ab 100644 (file)
--- a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild
+++ b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild,v 1.4 2011/03/13 12:56:27 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild,v 1.5 2011/10/20 08:54:01 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS wrappers for HMMER - Biological sequence analysis with profile HMMs"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild
index a3161435b80c917db73b4d69b82f016e411017e7..780bc60e149c8ffd252934e2fb4d4431a7dbe504 100644 (file)
--- a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild
+++ b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild,v 1.3 2011/03/13 12:56:27 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild,v 1.4 2011/10/20 08:54:01 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS wrappers for HMMER - Biological sequence analysis with profile HMMs"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-iprscan/ChangeLog b/sci-biology/embassy-iprscan/ChangeLog
index d34fca8e683cbe78b3af72dafc03645d0e4ea081..d282ee0ce54f9a787bacd03e34def4ba61c41b22 100644 (file)
--- a/sci-biology/embassy-iprscan/ChangeLog
+++ b/sci-biology/embassy-iprscan/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-iprscan
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/ChangeLog,v 1.6 2011/03/13 12:56:54 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/ChangeLog,v 1.7 2011/10/20 08:53:38 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-iprscan-4.3.1-r1.ebuild, embassy-iprscan-4.3.1.ebuild:
+  Fix SRC_URI for emboss
 
   13 Mar 2011; Raúl Porcel <armin76@gentoo.org> embassy-iprscan-4.3.1.ebuild,
   embassy-iprscan-4.3.1-r1.ebuild:

diff --git a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild
index 165f3a9672c3ec35b3b326bb2c310e3f0f42b490..90fb625c093a9c9d99f396327f8befd4bd97e4d8 100644 (file)
--- a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild
+++ b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild,v 1.3 2011/03/13 12:56:54 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild,v 1.4 2011/10/20 08:53:38 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="InterProScan motif detection add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild
index d7dff4d5e8bc2f507be95672bc9f088722785f04..3a7c4d7af08f7e3c65596ea9d5a4a67aa18b4eea 100644 (file)
--- a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild
+++ b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild,v 1.3 2011/03/13 12:56:54 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild,v 1.4 2011/10/20 08:53:38 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="InterProScan motif detection add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-memenew/ChangeLog b/sci-biology/embassy-memenew/ChangeLog
index 1a12b710a42c36dc52842cac0d792e332f20b172..0a5ca0d253f556933d009ad8107521518b63164c 100644 (file)
--- a/sci-biology/embassy-memenew/ChangeLog
+++ b/sci-biology/embassy-memenew/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-memenew
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/ChangeLog,v 1.13 2011/04/05 06:10:02 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/ChangeLog,v 1.14 2011/10/20 08:53:17 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-memenew-0.1.0-r1.ebuild, embassy-memenew-4.0.0.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-memenew-0.1.0.ebuild:
   Dropped old, due to unsatisfied deps

diff --git a/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild b/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild
index 7e7851f6b513dc20693523b7cee5954e4c69e995..40e226cb5b05b758466063f0d900ecaccf421283 100644 (file)
--- a/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild
+++ b/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild,v 1.4 2011/03/13 12:57:21 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild,v 1.5 2011/10/20 08:53:17 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS wrappers for MEME - Multiple Em for Motif Elicitation"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild b/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild
index 906989fc1b87b8a0d70f5ae8905f9a760c212c63..43d57a4c3b0a69e22eee57991da2cc38c701b3aa 100644 (file)
--- a/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild
+++ b/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild,v 1.3 2011/03/13 12:57:21 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild,v 1.4 2011/10/20 08:53:17 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS wrappers for MEME - Multiple Em for Motif Elicitation"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-mse/ChangeLog b/sci-biology/embassy-mse/ChangeLog
index 4c35dcff11b9fb201bf44647bf1a8f8198a61438..cd6f7078ef0a8c5cff19017089c6df44e64cb55c 100644 (file)
--- a/sci-biology/embassy-mse/ChangeLog
+++ b/sci-biology/embassy-mse/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-mse
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.37 2011/04/05 06:11:58 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.38 2011/10/20 08:52:56 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-mse-1.0.0-r6.ebuild, embassy-mse-1.0.0-r7.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-mse-1.0.0-r3.ebuild,
   -embassy-mse-1.0.0-r4.ebuild:

diff --git a/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild b/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild
index a7ef6ae37e639e122dccb8fbb015f643e6de5057..6b5a771e21c3be0be1dd191c37246909bb45ee7b 100644 (file)
--- a/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild
+++ b/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild,v 1.3 2011/03/13 12:58:16 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild,v 1.4 2011/10/20 08:52:56 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of MSE - Multiple Sequence Screen Editor"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild b/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild
index 66106d9661194375dccda3aecc56c9155d553c9b..ec3c5aa550978a4c3e67e91f24481bf581c39d55 100644 (file)
--- a/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild
+++ b/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild,v 1.3 2011/03/13 12:58:16 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild,v 1.4 2011/10/20 08:52:56 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of MSE - Multiple Sequence Screen Editor"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-phylipnew/ChangeLog b/sci-biology/embassy-phylipnew/ChangeLog
index caea87fffc45a57e628bd63cf203761823f1271e..d50f179256937576921417a209051454dc173dad 100644 (file)
--- a/sci-biology/embassy-phylipnew/ChangeLog
+++ b/sci-biology/embassy-phylipnew/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-phylipnew
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/ChangeLog,v 1.14 2011/04/05 06:10:57 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/ChangeLog,v 1.15 2011/10/20 08:50:46 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-phylipnew-3.68.ebuild, embassy-phylipnew-3.67.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-phylipnew-3.6b.ebuild:
   Dropped old, due to unsatisfied deps

diff --git a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild
index b1af62bf4a90b83634ba593757ac0912ad6f16a6..a1cf66933488d2a04c3ab835b1decdc9323858fd 100644 (file)
--- a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild
+++ b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild,v 1.3 2011/03/13 12:58:43 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild,v 1.4 2011/10/20 08:50:46 xarthisius Exp $
 
 EBOV="6.0.1"
 
@@ -8,7 +8,7 @@ inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of PHYLIP - The Phylogeny Inference Package"
 LICENSE="freedist"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild
index 0dc5d212db35e7c2b1780d4cff8c25ed5c8ebb9d..7f797a393ce9fecdf84a76337ba9d51a76a19474 100644 (file)
--- a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild
+++ b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild,v 1.3 2011/03/13 12:58:43 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild,v 1.4 2011/10/20 08:50:46 xarthisius Exp $
 
 EBOV="6.1.0"
 
@@ -8,7 +8,7 @@ inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of PHYLIP - The Phylogeny Inference Package"
 LICENSE="freedist"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-signature/ChangeLog b/sci-biology/embassy-signature/ChangeLog
index 791f51d4e0da095c2b01e633e903bc2f8a1295a4..d296e07d1e4e5859529e19a38e93ec49d9c9ae91 100644 (file)
--- a/sci-biology/embassy-signature/ChangeLog
+++ b/sci-biology/embassy-signature/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-signature
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/ChangeLog,v 1.21 2011/04/05 06:09:47 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/ChangeLog,v 1.22 2011/10/20 08:50:16 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-signature-0.1.0-r3.ebuild, embassy-signature-0.1.0-r4.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org>
   -embassy-signature-0.1.0-r1.ebuild:

diff --git a/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild b/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild
index 2b1c9097231359d70a450be20c2501ac65c3b15e..f0f7c11a1b7a935ca5eda6f12112e9e4f728be67 100644 (file)
--- a/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild
+++ b/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:59:11 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:50:16 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="Protein signature add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild b/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild
index 2081fa9b0977a69a714b442d6cb28206a369e5bc..c977b255fc2c99b37d658ca05cfc6a128351d1ac 100644 (file)
--- a/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild
+++ b/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:59:11 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:50:16 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="Protein signature add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-structure/ChangeLog b/sci-biology/embassy-structure/ChangeLog
index 8c4e74ec59bf1c9c175b177c19b2634191cf17e5..fa7454dba1a84e75f4e8708bc76652ac63af4a97 100644 (file)
--- a/sci-biology/embassy-structure/ChangeLog
+++ b/sci-biology/embassy-structure/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-structure
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/ChangeLog,v 1.21 2011/04/05 06:07:51 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/ChangeLog,v 1.22 2011/10/20 08:49:50 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-structure-0.1.0-r4.ebuild, embassy-structure-0.1.0-r3.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org>
   -embassy-structure-0.1.0-r1.ebuild:

diff --git a/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild b/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild
index 67760b71deb43bcd7f7878ec56145769f4f5cad2..747c78cb1234968280d9a67c3d786bc4e2c240d4 100644 (file)
--- a/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild
+++ b/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:59:38 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:49:50 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="Protein structure add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild b/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild
index d6f17120660658f5c8ff29c0e1660651a33ad2b6..9939738081af6596986900765ee7df09cf00ce0e 100644 (file)
--- a/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild
+++ b/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:59:38 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:49:50 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="Protein structure add-on package for EMBOSS"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-topo/ChangeLog b/sci-biology/embassy-topo/ChangeLog
index 51ad687118a1b80b90e1630790b8dc4943bc98ef..c62024a9dab24a46d74630910a8478f26ef48fe3 100644 (file)
--- a/sci-biology/embassy-topo/ChangeLog
+++ b/sci-biology/embassy-topo/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-topo
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/ChangeLog,v 1.31 2011/04/05 06:03:14 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/ChangeLog,v 1.32 2011/10/20 08:49:25 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-topo-1.0.0-r5.ebuild, embassy-topo-1.0.0-r6.ebuild:
+  Fix SRC_URI for emboss
 
   05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-topo-1.0.0-r3.ebuild:
   Dropped old, due to unsatisfied deps

diff --git a/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild b/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild
index c2b497bdd28208141445c3292364d943307d12e8..885620b65c48b26f384fa2ddfa62ce2f65a4c72a 100644 (file)
--- a/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild
+++ b/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild,v 1.3 2011/03/13 13:00:06 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild,v 1.4 2011/10/20 08:49:25 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of TOPO - Transmembrane protein display"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"

diff --git a/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild b/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild
index 2e4e6301b6e47678ec2bac64150e517788d026c5..b25c4f6351adbf4a7f9e32105f574dcffccfaa13 100644 (file)
--- a/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild
+++ b/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild,v 1.3 2011/03/13 13:00:06 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild,v 1.4 2011/10/20 08:49:25 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of TOPO - Transmembrane protein display"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-vienna/ChangeLog b/sci-biology/embassy-vienna/ChangeLog
index bc943fad42eca56c1b4409782866379c83b005b6..23c45baf17b9da01febf408f8ea23aab75668cd4 100644 (file)
--- a/sci-biology/embassy-vienna/ChangeLog
+++ b/sci-biology/embassy-vienna/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/embassy-vienna
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/ChangeLog,v 1.9 2011/03/13 13:00:33 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/ChangeLog,v 1.10 2011/10/20 08:49:03 xarthisius Exp $
+
+  20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org>
+  embassy-vienna-1.7.2.ebuild, embassy-vienna-1.7.2-r1.ebuild:
+  Fix SRC_URI for emboss
 
   13 Mar 2011; Raúl Porcel <armin76@gentoo.org> embassy-vienna-1.7.2.ebuild,
   embassy-vienna-1.7.2-r1.ebuild:

diff --git a/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild b/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild
index 0bcb66bd05d5e21e427585c452f1df48fc1b204b..8c71911e4ee4dbc50dca289d11eb77036abfa4af 100644 (file)
--- a/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild
+++ b/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild,v 1.3 2011/03/13 13:00:33 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild,v 1.4 2011/10/20 08:49:03 xarthisius Exp $
 
 EBOV="6.1.0"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of the Vienna RNA package - RNA folding"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"

diff --git a/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild b/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild
index 2c6412ae1dac0039338690c0e55a59aff34f099b..042a5c7aa11472f080478dd6e54226c0f9329fe6 100644 (file)
--- a/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild
+++ b/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild
@@ -1,13 +1,13 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild,v 1.3 2011/03/13 13:00:33 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild,v 1.4 2011/10/20 08:49:03 xarthisius Exp $
 
 EBOV="6.0.1"
 
 inherit embassy
 
 DESCRIPTION="EMBOSS integrated version of the Vienna RNA package - RNA folding"
-SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
+SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz
        mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz"
 
 KEYWORDS="amd64 ~ppc x86"