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+++ /dev/null
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/vmd-1.9.1-r1.ebuild,v 1.5 2013/03/01 08:23:03 jlec Exp $
-
-EAPI=5
-
-PYTHON_DEPEND="2"
-
-inherit eutils multilib prefix python toolchain-funcs
-
-DESCRIPTION="Visual Molecular Dynamics"
-HOMEPAGE="http://www.ks.uiuc.edu/Research/vmd/"
-SRC_URI="
- http://dev.gentoo.org/~jlec/distifles/${P}-gentoo-patches-2.tar.xz
- ${P}.src.tar.gz"
-
-SLOT="0"
-LICENSE="vmd"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="cuda msms povray tachyon xinerama"
-
-RESTRICT="fetch"
-
-# currently, tk-8.5* with USE=truetype breaks some
-# tk apps such as Sequence Viewer or Timeline.
-CDEPEND="
- =dev-lang/tk-8.5*[-truetype]
- dev-lang/perl
- dev-python/numpy
- sci-libs/netcdf
- virtual/opengl
- >=x11-libs/fltk-1.1.10-r2:1
- x11-libs/libXft
- x11-libs/libXi
- cuda? (
- >=dev-util/nvidia-cuda-toolkit-3.1
- || (
- sys-devel/gcc:4.4
- sys-devel/gcc:4.5 )
- )
- xinerama? ( x11-libs/libXinerama )"
-DEPEND="${CDEPEND}
- dev-lang/swig"
-RDEPEND="${CDEPEND}
- sci-biology/stride
- sci-chemistry/surf
- x11-terms/xterm
- msms? ( sci-chemistry/msms-bin )
- povray? ( media-gfx/povray )
- tachyon? ( media-gfx/tachyon )"
-
-VMD_DOWNLOAD="http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD"
-# Binary only plugin!!
-QA_PREBUILT="usr/lib*/vmd/plugins/LINUX/tcl/intersurf1.1/bin/intersurf.so"
-QA_FLAGS_IGNORED_amd64=" usr/lib64/vmd/plugins/LINUX/tcl/volutil1.3/volutil"
-QA_FLAGS_IGNORED_x86=" usr/lib/vmd/plugins/LINUX/tcl/volutil1.3/volutil"
-
-pkg_nofetch() {
- elog "Please download ${P}.src.tar.gz from"
- elog "${VMD_DOWNLOAD}"
- elog "after agreeing to the license and get"
- elog "http://dev.gentoo.org/~jlec/distfiles/${P}-gentoo-patches-2.tar.xz"
- elog "Place both in ${DISTDIR}"
-}
-
-pkg_setup() {
- python_set_active_version 2
- python_pkg_setup
-}
-
-src_prepare() {
- cd "${WORKDIR}"/plugins
-
- epatch "${WORKDIR}"/${P}-gentoo-plugins.patch
-
- [[ ${SILENT} == yes ]] || sed '/^.SILENT/d' -i $(find -name Makefile)
-
- sed \
- -e "s:CC = gcc:CC = $(tc-getCC):" \
- -e "s:CXX = g++:CXX = $(tc-getCXX):" \
- -e "s:COPTO =.*\":COPTO = -fPIC -o\":" \
- -e "s:LOPTO = .*\":LOPTO = ${LDFLAGS} -fPIC -o\":" \
- -e "s:CCFLAGS =.*\":CCFLAGS = ${CFLAGS}\":" \
- -e "s:CXXFLAGS =.*\":CXXFLAGS = ${CXXFLAGS}\":" \
- -e "s:SHLD = gcc:SHLD = $(tc-getCC) -shared:" \
- -e "s:SHXXLD = g++:SHXXLD = $(tc-getCXX) -shared:" \
- -e "s:-ltcl8.5:-ltcl:" \
- -i Make-arch || die "Failed to set up plugins Makefile"
-
- sed \
- -e '/^AR /s:=:?=:g' \
- -e '/^RANLIB /s:=:?=:g' \
- -i ../plugins/*/Makefile || die
-
- tc-export AR RANLIB
-
- sed \
- -e "s:\$(CXXFLAGS)::g" \
- -i hesstrans/Makefile || die
-
- # prepare vmd itself
- cd "${S}"
-
- epatch "${WORKDIR}"/${P}-gentoo-base.patch
-
- # PREFIX
- sed \
- -e "s:/usr/include/:${EPREFIX}/usr/include:g" \
- -i configure || die
-
- sed \
- -e "s:gentoo-bindir:${ED}/usr/bin:g" \
- -e "s:gentoo-libdir:${ED}/usr/$(get_libdir):g" \
- -e "s:gentoo-opengl-include:${EPREFIX}/usr/include/GL:g" \
- -e "s:gentoo-opengl-libs:${EPREFIX}/usr/$(get_libdir):g" \
- -e "s:gentoo-gcc:$(tc-getCC):g" \
- -e "s:gentoo-g++:$(tc-getCXX):g" \
- -e "s:gentoo-nvcc:${EPREFIX}/opt/cuda/bin/nvcc:g" \
- -e "s:gentoo-cflags:${CFLAGS}:g" \
- -e "s:gentoo-cxxflags:${CXXFLAGS}:g" \
- -e "s:gentoo-nvflags: -O3 -v:g" \
- -e "s:gentoo-ldflags:${LDFLAGS}:g" \
- -e "s:gentoo-plugindir:${WORKDIR}/plugins:g" \
- -e "s:gentoo-fltk-include:$(fltk-config --includedir):g" \
- -e "s:gentoo-fltk-libs:$(dirname $(fltk-config --libs)) -Wl,-rpath,$(dirname $(fltk-config --libs)):g" \
- -e "s:gentoo-netcdf-include:${EPREFIX}/usr/include:g" \
- -e "s:gentoo-netcdf-libs:${EPREFIX}/usr/$(get_libdir):g" \
- -i configure || die
-
-# local NUMPY_INCLUDE="numpy/core/include"
-# sed -e "s:gentoo-python-include:${EPREFIX}$(python_get_includedir):" \
-# -e "s:gentoo-python-lib:${EPREFIX}$(python_get_libdir):" \
-# -e "s:gentoo-python-link:$(PYTHON):" \
-# -e "s:gentoo-numpy-include:${EPREFIX}$(python_get_sitedir)/${NUMPY_INCLUDE}:" \
-# -i configure || die "failed setting up python"
-
- if use cuda; then
- local gcc_bindir
- if has_version sys-devel/gcc:4.5; then
- gcc_bindir="$(ls -d ${EPREFIX}/usr/*pc-linux-gnu/gcc-bin/4.5*)"
- elif has_version sys-devel/gcc:4.4; then
- gcc_bindir="$(ls -d ${EPREFIX}/usr/*pc-linux-gnu/gcc-bin/4.4*)"
- else
- ewarn "Please install gcc with a version between 4.4* and 4.5*"
- fi
-
- sed \
- -e "s:gentoo-cuda-lib:${EPREFIX}/opt/cuda/$(get_libdir):g" \
- -e "/^\$arch_nvccflags/s:=:= \"--compiler-bindir=${gcc_bindir} \" . \n:1" \
- -i configure || die
- fi
-
- sed \
- -e "s:LINUXPPC:LINUX:g" \
- -e "s:LINUXALPHA:LINUX:g" \
- -e "s:LINUXAMD64:LINUX:g" \
- -e "s:gentoo-stride:${EPREFIX}/usr/bin/stride:g" \
- -e "s:gentoo-surf:${EPREFIX}/usr/bin/surf:g" \
- -e "s:gentoo-tachyon:${EPREFIX}/usr/bin/tachyon:g" \
- -i "${S}"/bin/vmd.sh || die "failed setting up vmd wrapper script"
-}
-
-src_configure() {
- local myconf="OPENGL FLTK TK TCL PTHREADS PYTHON IMD NETCDF NUMPY NOSILENT XINPUT"
- rm -f configure.options && echo $myconf >> configure.options
-
- use cuda && myconf+=" CUDA"
-# use mpi && myconf+=" MPI"
-# use tachion && myconf+=" LIBTACHYON"
- use xinerama && myconf+=" XINERAMA"
-
- export \
- PYTHON_INCLUDE_DIR="${EPREFIX}$(python_get_includedir)" \
- PYTHON_LIBRARY_DIR="${EPREFIX}$(python_get_libdir)" \
- PYTHON_LIBRARY="$(python_get_library -l)" \
- NUMPY_INCLUDE_DIR="${EPREFIX}$(python_get_sitedir)/numpy/core/include" \
- NUMPY_LIBRARY_DIR="${EPREFIX}$(python_get_sitedir)/numpy/core/include"
-
- ./configure LINUX \
- ${myconf} || die
-}
-
-src_compile() {
- # build plugins
- cd "${WORKDIR}"/plugins
-
- emake \
- TCLINC="-I${EPREFIX}/usr/include" \
- TCLLIB="-L${EPREFIX}/usr/$(get_libdir)" \
- NETCDFLIB="$(pkg-config --libs-only-L netcdf) ${EPREFIX}/usr/$(get_libdir)/libnetcdf.so" \
- NETCDFINC="$(pkg-config --cflags-only-I netcdf) ${EPREFIX}/usr/include" \
- NETCDFLDFLAGS="$(pkg-config --libs netcdf)" \
- LINUX
-
- # build vmd
- cd "${S}"/src
- emake
-}
-
-src_install() {
- # install plugins
- cd "${WORKDIR}"/plugins
- emake \
- PLUGINDIR="${ED}/usr/$(get_libdir)/${PN}/plugins" \
- distrib
-
- # install vmd
- cd "${S}"/src
- emake install
-
- # install docs
- cd "${S}"
- dodoc Announcement README doc/ig.pdf doc/ug.pdf
-
- # remove some of the things we don't want and need in
- # /usr/lib
- cd "${ED}"/usr/$(get_libdir)/vmd
- rm -fr doc README Announcement LICENSE || \
- die "failed to clean up /usr/lib/vmd directory"
-
- # adjust path in vmd wrapper
- sed \
- -e "s:${ED}::" -i "${ED}"/usr/bin/${PN} \
- -e "/^defaultvmddir/s:^.*$:defaultvmddir=\"${EPREFIX}/usr/$(get_libdir)/${PN}\":g" \
- || die "failed to set up vmd wrapper script"
-
- # install icon and generate desktop entry
- insinto /usr/share/pixmaps
- doins "${WORKDIR}"/vmd.png
- eprefixify "${WORKDIR}"/vmd.desktop
- domenu "${WORKDIR}"/vmd.desktop
-}
projects / gentoo.git / commitdiff