New version.

diff --git a/app-sci/cutg/ChangeLog b/app-sci/cutg/ChangeLog
index 01831071428f6cfbc4a796f126255f557b6c4d92..e1b2938beffbcf7ca3b59455a2ce1ae9859f8cf0 100644 (file)
--- a/app-sci/cutg/ChangeLog
+++ b/app-sci/cutg/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for app-sci/cutg
 # Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/cutg/ChangeLog,v 1.6 2004/11/01 01:48:18 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/cutg/ChangeLog,v 1.7 2004/11/23 20:23:18 ribosome Exp $
+
+*cutg-144 (23 Nov 2004)
+
+  23 Nov 2004; Olivier Fisette <ribosome@gentoo.org> +cutg-144.ebuild:
+  New version.
 
   31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> -cutg-142.ebuild,
   cutg-143.ebuild:

diff --git a/app-sci/cutg/cutg-144.ebuild b/app-sci/cutg/cutg-144.ebuild
new file mode 100644 (file)
index 0000000..e198ba2
--- /dev/null
+++ b/app-sci/cutg/cutg-144.ebuild
@@ -0,0 +1,40 @@
+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/cutg/cutg-144.ebuild,v 1.1 2004/11/23 20:23:18 ribosome Exp $
+
+DESCRIPTION="Codon usage tables calculated from GenBank"
+HOMEPAGE="http://www.kazusa.or.jp/codon/"
+SRC_URI="ftp://ftp.kazusa.or.jp/pub/codon/current/compressed/CUTG.${PV}.tar.gz"
+LICENSE="public-domain"
+
+SLOT="0"
+KEYWORDS="~x86 ~ppc"
+IUSE="no-emboss no-rawdb"
+
+S=${WORKDIR}
+
+src_compile() {
+       # Index the database for use with emboss if emboss is installed and
+       # the user did not explicitly request not to index the database.
+       if [ -e /usr/bin/cutgextract ] && ! use no-emboss; then
+               mkdir CODONS
+               einfo "Indexing CUTG for usage with EMBOSS."
+               EMBOSS_DATA=. cutgextract -auto -directory ${S} || die \
+                       "Indexing CUTG failed."
+       fi
+}
+
+src_install() {
+       if ! use no-rawdb; then
+               mkdir -p ${D}/usr/share/${PN}
+               mv *.codon *.spsum ${D}/usr/share/${PN}
+       fi
+       dodoc README
+       if [ -e /usr/bin/cutgextract ] && ! use no-emboss; then
+               mkdir -p ${D}/usr/share/EMBOSS/data/CODONS
+               cd CODONS
+               for file in *; do
+                       mv ${file} ${D}/usr/share/EMBOSS/data/CODONS
+               done
+       fi
+}

diff --git a/app-sci/cutg/files/digest-cutg-144 b/app-sci/cutg/files/digest-cutg-144
new file mode 100644 (file)
index 0000000..f79c6a6
--- /dev/null
+++ b/app-sci/cutg/files/digest-cutg-144
@@ -0,0 +1 @@
+MD5 2bea63f0124ef7cb360bddeb0465e548 CUTG.144.tar.gz 124856915