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resepect LDFLAGS, #316059
authorJustin Lecher <jlec@gentoo.org>
Mon, 19 Apr 2010 17:49:24 +0000 (17:49 +0000)
committerJustin Lecher <jlec@gentoo.org>
Mon, 19 Apr 2010 17:49:24 +0000 (17:49 +0000)
Package-Manager: portage-2.2_rc67/cvs/Linux x86_64

sci-chemistry/mead/ChangeLog patch | blob | history
sci-chemistry/mead/Manifest patch | blob | history
sci-chemistry/mead/files/mead-2.2.7-respect-flags.patch [new file with mode: 0644] patch | blob
sci-chemistry/mead/files/respect-cflags.patch [deleted file] patch | blob | history
sci-chemistry/mead/mead-2.2.7-r1.ebuild [new file with mode: 0644] patch | blob
sci-chemistry/mead/mead-2.2.7.ebuild patch | blob | history

diff --git a/sci-chemistry/mead/ChangeLog b/sci-chemistry/mead/ChangeLog
index 478d87319926392a0ac97720743a8551785c0ff2..fc75f94f5ed351b465d48336aafd2db150324bf9 100644 (file)
--- a/sci-chemistry/mead/ChangeLog
+++ b/sci-chemistry/mead/ChangeLog
@@ -1,6 +1,13 @@
 # ChangeLog for sci-chemistry/mead
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/ChangeLog,v 1.7 2010/04/19 07:02:20 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/ChangeLog,v 1.8 2010/04/19 17:49:23 jlec Exp $
+
+*mead-2.2.7-r1 (19 Apr 2010)
+
+  19 Apr 2010; Justin Lecher <jlec@gentoo.org> mead-2.2.7.ebuild,
+  +mead-2.2.7-r1.ebuild, +files/mead-2.2.7-respect-flags.patch,
+  -files/respect-cflags.patch:
+  respect LDFLAGS, #316059
 
   19 Apr 2010; Justin Lecher <jlec@gentoo.org> -mead-2.2.5.ebuild,
   mead-2.2.7.ebuild:
diff --git a/sci-chemistry/mead/Manifest b/sci-chemistry/mead/Manifest
index ea2cc7db0f0475b87ac2a8246f7040310778b88f..89127cfe3a3336bd8eb829658b45228f5d3178eb 100644 (file)
--- a/sci-chemistry/mead/Manifest
+++ b/sci-chemistry/mead/Manifest
@@ -3,15 +3,16 @@ Hash: SHA1
 
 AUX mead-2.2.7-gcc43.patch 469 RMD160 26b213e10918cd5cca859d231220a36d6d5d00d6 SHA1 37f2b71fe72a81a429b9ea9dff22edecd88c6c1b SHA256 00761d07cbe4445ba3fbccfaff23b43d2de133857181b242f60a9608841c91da
 AUX mead-2.2.7-respect-cflags.patch 2229 RMD160 da621223ba4ae992046f2ecf7877547c6c6d9285 SHA1 54b0d3cf3b460aaefbd47c4e1a92fc3cf75754df SHA256 a336e59311c312c15f636b9242fc1602b8d8b4662aeae869fdef8ed120170ba2
-AUX respect-cflags.patch 2202 RMD160 46983e0a9a550a1674f4f17125f1ba558c2d7ad3 SHA1 94e3f8b732def4ec3bd08e0f7270c91cdd3ee7dd SHA256 78cbb06d6857db50cb7680eb0e84e68a8042085067d6f70d0afc8ffa95b62e03
+AUX mead-2.2.7-respect-flags.patch 2391 RMD160 b458f32d43cd5cd5d3b5cadad2fca5dd4c6813cd SHA1 8e968d9067ca98d32da2bbb467ba5b548e86a449 SHA256 5e66caef6658208ab1f6d5344cab391baaf320709bdd18dfe03c3eb5e197938b
 DIST mead-2.2.7.tar.gz 806319 RMD160 9adf9743e44061779f9ac3b9064abb9164ad3e58 SHA1 6d3bbda29a5f8fdf26600e036ca8debacc37b90e SHA256 fd2a4b357bbd847ac9b255563034d7e71bf16cf59efa371d966b6fbbe9b4cd7c
-EBUILD mead-2.2.7.ebuild 976 RMD160 fadab09c63555be8379aaba69dd7eb4159af7f34 SHA1 da3728cae6f43c6bc0b6a83ed78be24ad845bf1c SHA256 dd2d1cc956ca257707d04d941a075871380c32ca4c7f4908c89c9cc6167f65cc
-MISC ChangeLog 1313 RMD160 446ec5c7af1a3a0a9274131b6c0a0ebfade07f2f SHA1 595d940c98a3456d8c520e8e6f29a858422fdccb SHA256 82214afb222db81e739c519ea977c532811ea858343cf20f06178cf5b2ed0d78
+EBUILD mead-2.2.7-r1.ebuild 978 RMD160 6a475d58e09c4d6cda81a7ddbf25aaf8431de0d3 SHA1 476d758beff90ee839ed63bef2c34f26e8d14ddc SHA256 f0e8727755e25002d969eaeeab4bcb19537f0c6e28e634c82b267fbb69c49a79
+EBUILD mead-2.2.7.ebuild 975 RMD160 2b9bfcc9d188387f35d212c0c91095412c06c0b2 SHA1 0b1eb295a6044344488ea389afe61a5a14072192 SHA256 6e5596a19fba503992ff6b168bf2486392461199efbe879d3a509ea2087d4e77
+MISC ChangeLog 1532 RMD160 6d78ced3cc4c509ec2bd2eadeb52b553edf3269f SHA1 e8943671df9278ec2199c71be00e381b34e20dc3 SHA256 f35739d64d7584a46e03b498bb29b2f6caf9981e493abea94ebda165c0fec9d7
 MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852
 -----BEGIN PGP SIGNATURE-----
 Version: GnuPG v2.0.14 (GNU/Linux)
 
-iEYEARECAAYFAkvMAAIACgkQgAnW8HDreRZTrQCfVBDS2PIoASe81t5+iQKOJJ0E
-838AnRBQGQ5K/4FFQnr81DzU9t1R0Sv8
-=j7ok
+iEYEARECAAYFAkvMl6sACgkQgAnW8HDreRZB6QCfYhs9QnzI1FrZRJtgjEGeG7Ox
+xxkAoNNGszsdjN+rz8PXJzls5Da8cE2m
+=wqLM
 -----END PGP SIGNATURE-----
diff --git a/sci-chemistry/mead/files/mead-2.2.7-respect-flags.patch b/sci-chemistry/mead/files/mead-2.2.7-respect-flags.patch
new file mode 100644 (file)
index 0000000..9ffb238
--- /dev/null
+++ b/sci-chemistry/mead/files/mead-2.2.7-respect-flags.patch
@@ -0,0 +1,74 @@
+diff --git a/apps/Makefile.common.in b/apps/Makefile.common.in
+index 15c61ae..f15d71d 100644
+--- a/apps/Makefile.common.in
++++ b/apps/Makefile.common.in
+@@ -36,10 +36,10 @@ REGEX_CPP  = @REGEX_CPP@
+ LIBS          = @LIBS@ -lm
+ 
+ ALL_CPPFLAGS  = -I. $(LOCALINCS) $(CPPFLAGS) $(REGEX_CPP) $(CXX_DEFS)
+-ALL_CXXFLAGS  = $(CXX_OPTFLAGS) $(CXX_DEBUGFLAGS)
+-ALL_CFLAGS    = $(CC_DEBUGFLAGS) $(CC_OPTFLAGS)
++ALL_CXXFLAGS  = @CXXFLAGS@
++ALL_CFLAGS    = @CFLAGS@
+ 
+-CXXLINK = $(CXX) $(ALL_CPPFLAGS) $(CXX_DEBUGFLAGS) $(CXX_OPTFLAGS) \
++CXXLINK = $(CXX) $(ALL_CPPFLAGS) @CXXFLAGS@ \
+            $(LDFLAGS)
+ 
+ .SUFFIXES: .cc .o
+diff --git a/apps/libmso/Makefile.in b/apps/libmso/Makefile.in
+index 249c25b..9d23665 100644
+--- a/apps/libmso/Makefile.in
++++ b/apps/libmso/Makefile.in
+@@ -35,8 +35,8 @@ INSTALL              = @INSTALL@
+ INSTALL_PROGRAM       = @INSTALL_PROGRAM@
+ 
+ ALL_CPPFLAGS  = -I. $(LOCALINCS) $(CPPFLAGS) $(REGEX_CPP) $(CXX_DEFS)
+-ALL_CXXFLAGS  = $(CXX_OPTFLAGS) $(CXX_DEBUGFLAGS)
+-ALL_CFLAGS    = $(CC_DEBUGFLAGS) $(CC_OPTFLAGS)
++ALL_CXXFLAGS  = @CXXFLAGS@
++ALL_CFLAGS    = @CFLAGS@
+ 
+ .SUFFIXES:
+ .SUFFIXES: .cc .o
+diff --git a/apps/redti/Makefile.in b/apps/redti/Makefile.in
+index c4aa5ca..9561bf3 100644
+--- a/apps/redti/Makefile.in
++++ b/apps/redti/Makefile.in
+@@ -21,7 +21,7 @@ CFLAGS       = @CFLAGS@
+ redti_objs = redti.o rfixpro.o rfixprosee.o pfix.o tc.o
+ 
+ redti : $(redti_objs)
+-      $(CC) $(CFLAGS) $(redti_objs) -lm -o redti
++      $(CC) $(CFLAGS) $(LDFLAGS) $(redti_objs) -lm -o redti
+ 
+ appname = redti
+ include ../Makefile.common
+diff --git a/libmead/Makefile.in b/libmead/Makefile.in
+index 3d4d5f0..8b4a4ac 100644
+--- a/libmead/Makefile.in
++++ b/libmead/Makefile.in
+@@ -99,8 +99,8 @@ PYTHONINC    = @PYTHONINC@
+ INCLUDES      = -I$(top_srcdir)
+ 
+ ALL_CPPFLAGS  = $(INCLUDES) $(CPPFLAGS) $(REGEX_CPP) $(CXX_DEFS)
+-ALL_CXXFLAGS  = $(CXX_OPTFLAGS) $(CXX_DEBUGFLAGS) $(CXX_SHAREDFLAGS)
+-ALL_CFLAGS    = $(CC_DEBUGFLAGS) $(CC_OPTFLAGS)
++ALL_CXXFLAGS  = @CXXFLAGS@
++ALL_CFLAGS    = @CFLAGS@
+ 
+ 
+ 
+diff --git a/swig/Makefile.in b/swig/Makefile.in
+index 81b3b4e..8410307 100644
+--- a/swig/Makefile.in
++++ b/swig/Makefile.in
+@@ -58,7 +58,7 @@ CPP_FLAGS    = -DSWIG @CPPFLAGS@
+ CXX_FLAGS     = @CXX_NOOPTFLAGS@ @CXX_DEBUGFLAGS@ @CXX_SHAREDFLAGS@
+ CXX_DYNLIB_FLAGS = @CXX_DYNLIB_FLAGS@
+ 
+-ALL_CXXFLAGS  = $(CPP_FLAGS) $(CXX_FLAGS)
++ALL_CXXFLAGS  = $(CPP_FLAGS) @CXXFLAGS@ @CXX_SHAREDFLAGS@
+ 
+ MEADINC               = -I$(top_srcdir) -I$(srcdir)
+ MEADLIBS      = -L../libmead -lmead
diff --git a/sci-chemistry/mead/files/respect-cflags.patch b/sci-chemistry/mead/files/respect-cflags.patch
deleted file mode 100644 (file)
index 5b982aa..0000000
--- a/sci-chemistry/mead/files/respect-cflags.patch
+++ /dev/null
@@ -1,57 +0,0 @@
-diff -ur mead-2.2.5.orig/apps/libmso/Makefile.in mead-2.2.5/apps/libmso/Makefile.in
---- mead-2.2.5.orig/apps/libmso/Makefile.in    2004-12-10 12:33:49.000000000 -0800
-+++ mead-2.2.5/apps/libmso/Makefile.in 2005-12-17 12:43:10.000000000 -0800
-@@ -35,8 +35,8 @@
- INSTALL_PROGRAM       = @INSTALL_PROGRAM@
- 
- ALL_CPPFLAGS  = -I. $(LOCALINCS) $(CPPFLAGS) $(REGEX_CPP) $(CXX_DEFS)
--ALL_CXXFLAGS  = $(CXX_OPTFLAGS) $(CXX_DEBUGFLAGS)
--ALL_CFLAGS    = $(CC_DEBUGFLAGS) $(CC_OPTFLAGS)
-+ALL_CXXFLAGS  = @CXXFLAGS@
-+ALL_CFLAGS    = @CFLAGS@
- 
- .SUFFIXES:
- .SUFFIXES: .cc .o
-diff -ur mead-2.2.5.orig/apps/Makefile.common.in mead-2.2.5/apps/Makefile.common.in
---- mead-2.2.5.orig/apps/Makefile.common.in    2004-11-19 14:49:56.000000000 -0800
-+++ mead-2.2.5/apps/Makefile.common.in 2005-12-17 12:38:33.000000000 -0800
-@@ -36,10 +36,10 @@
- LIBS          = @LIBS@ -lm
- 
- ALL_CPPFLAGS  = -I. $(LOCALINCS) $(CPPFLAGS) $(REGEX_CPP) $(CXX_DEFS)
--ALL_CXXFLAGS  = $(CXX_OPTFLAGS) $(CXX_DEBUGFLAGS)
--ALL_CFLAGS    = $(CC_DEBUGFLAGS) $(CC_OPTFLAGS)
-+ALL_CXXFLAGS  = @CXXFLAGS@
-+ALL_CFLAGS    = @CFLAGS@
- 
--CXXLINK = $(CXX) $(ALL_CPPFLAGS) $(CXX_DEBUGFLAGS) $(CXX_OPTFLAGS) \
-+CXXLINK = $(CXX) $(ALL_CPPFLAGS) @CXXFLAGS@ \
-            $(LDFLAGS)
- 
- .SUFFIXES: .cc .o
-diff -ur mead-2.2.5.orig/libmead/Makefile.in mead-2.2.5/libmead/Makefile.in
---- mead-2.2.5.orig/libmead/Makefile.in        2004-12-10 13:14:40.000000000 -0800
-+++ mead-2.2.5/libmead/Makefile.in     2005-12-17 12:40:12.000000000 -0800
-@@ -99,8 +99,8 @@
- INCLUDES      = -I$(top_srcdir)
- 
- ALL_CPPFLAGS  = $(INCLUDES) $(CPPFLAGS) $(REGEX_CPP) $(CXX_DEFS)
--ALL_CXXFLAGS  = $(CXX_OPTFLAGS) $(CXX_DEBUGFLAGS)
--ALL_CFLAGS    = $(CC_DEBUGFLAGS) $(CC_OPTFLAGS)
-+ALL_CXXFLAGS  = @CXXFLAGS@
-+ALL_CFLAGS    = @CFLAGS@
- 
- 
- 
-diff -ur mead-2.2.5.orig/swig/Makefile.in mead-2.2.5/swig/Makefile.in
---- mead-2.2.5.orig/swig/Makefile.in   2004-12-09 10:37:41.000000000 -0800
-+++ mead-2.2.5/swig/Makefile.in        2005-12-17 12:51:47.000000000 -0800
-@@ -58,7 +58,7 @@
- CXX_FLAGS     = @CXX_NOOPTFLAGS@ @CXX_DEBUGFLAGS@ @CXX_SHAREDFLAGS@
- CXX_DYNLIB_FLAGS = @CXX_DYNLIB_FLAGS@
- 
--ALL_CXXFLAGS  = $(CPP_FLAGS) $(CXX_FLAGS)
-+ALL_CXXFLAGS  = $(CPP_FLAGS) @CXXFLAGS@ @CXX_SHAREDFLAGS@
- 
- MEADINC               = -I$(top_srcdir) -I$(srcdir)
- MEADLIBS      = -L../libmead -lmead
diff --git a/sci-chemistry/mead/mead-2.2.7-r1.ebuild b/sci-chemistry/mead/mead-2.2.7-r1.ebuild
new file mode 100644 (file)
index 0000000..fe7e92a
--- /dev/null
+++ b/sci-chemistry/mead/mead-2.2.7-r1.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/mead-2.2.7-r1.ebuild,v 1.1 2010/04/19 17:49:23 jlec Exp $
+
+inherit eutils
+
+DESCRIPTION="Macroscopic Electrostatics with Atomic Detail"
+HOMEPAGE="http://www.teokem.lu.se/~ulf/Methods/mead.html"
+SRC_URI="ftp://ftp.scripps.edu/pub/bashford/${P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~x86"
+
+IUSE="python"
+
+RESTRICT="fetch"
+
+pkg_nofetch() {
+       elog "Download ${SRC_URI}"
+       elog "and place it in ${DISTDIR}."
+       elog
+       elog "Use \"anonymous\" as a login, and an email address as a password."
+}
+
+src_unpack() {
+       unpack ${A}
+       cd "${S}"
+
+       epatch "${FILESDIR}"/${P}-respect-flags.patch
+       epatch "${FILESDIR}"/${P}-gcc43.patch
+}
+
+src_compile() {
+       econf \
+               ${conf_opts} \
+               || die "configure failed"
+       emake || die "make failed"
+}
+
+src_install() {
+       # package hates emake DESTDIR="${D}" install
+       einstall || die "install failed"
+}
diff --git a/sci-chemistry/mead/mead-2.2.7.ebuild b/sci-chemistry/mead/mead-2.2.7.ebuild
index 1d835c53b78b31f29c85ac825631f11ae9afabcd..44c0d212f06a9b8474efba4d936790be47c9a8c7 100644 (file)
--- a/sci-chemistry/mead/mead-2.2.7.ebuild
+++ b/sci-chemistry/mead/mead-2.2.7.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2010 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/mead-2.2.7.ebuild,v 1.2 2010/04/19 07:02:20 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/mead-2.2.7.ebuild,v 1.3 2010/04/19 17:49:23 jlec Exp $
 
 inherit eutils
 
@@ -27,7 +27,7 @@ src_unpack() {
        unpack ${A}
        cd "${S}"
 
-       epatch "${FILESDIR}"/${P}-respect-cflags.patch
+       epatch "${FILESDIR}"/${P}-respect-flags.patch
        epatch "${FILESDIR}"/${P}-gcc43.patch
 }
 
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