@string{GSBeddard = "Beddard, Godfrey S."}
@string{KBeeson = "Beeson, K."}
@string{GIBell = "Bell, G. I."}
+@string{FBenedetti = "Benedetti, Fabrizio"}
@string{VBenes = "Benes, Vladimir"}
@string{ABensimon = "Bensimon, A."}
@string{DBensimon = "Bensimon, David"}
@string{BCBPRC = "Biochemical and Biophysical Research Communications"}
@string{Biochem = "Biochemistry"}
@string{BBABE = "Biochimica et Biophysica Acta (BBA) - Bioenergetics"}
+@string{BIOINFO = "Bioinformatics (Oxford, England)",}
@string{BPJ = "Biophys. J."}
@string{BIOSENSE = "Biosensors and Bioelectronics"}
@string{BIOTECH = "Biotechnology and Bioengineering"}
@string{SBroedel = "Broedel, Sheldon E."}
@string{BrooksCole = "Brooks/Cole"}
@string{BDBrowerToland = "Brower-Toland, Brent D."}
+@string{MBrucale = "Brucale, Marco"}
@string{TBruls = "Bruls, T."}
@string{VBrumfeld = "Brumfeld, Vlad"}
@string{JDBryngelson = "Bryngelson, J. D."}
@string{GGloeckner = "Gloeckner, G."}
@string{AGluecksmann = "Gluecksmann, A."}
@string{JDGocayne = "Gocayne, J. D."}
+@string{AGomezCasado = "Gomez-Casado, Alberto"}
@string{BGompertz = "Gompertz, Benjamin"}
@string{FGong = "Gong, F."}
@string{MGorokhov = "Gorokhov, M."}
@string{JPRyckaert = "Ryckaert, Jean-Paul"}
@string{YSakaki = "Sakaki, Y."}
@string{SSalzberg = "Salzberg, S."}
-@string{BSamori = "Samori, Bruno"}
+@string{BSamori = "Samor{\`i}, Bruno"}
+@string{MSandal = "Sandal, Massimo"}
@string{RSanders = "Sanders, R."}
@string{ASarkar = "Sarkar, Atom"}
@string{TSasaki = "Sasaki, T."}
spring that adapts to the physiological state of the cell."
}
+@article{ labeit95,
+ author = SLabeit #" and "# BKolmerer,
+ title = "Titins: giant proteins in charge of muscle ultrastructure
+ and elasticity.",
+ journal = SCI,
+ year = 1995,
+ month = oct,
+ day = 13,
+ address = "European Molecular Biology Laboratory, Heidelberg, Germany.",
+ volume = 270,
+ number = 5234,
+ pages = "293--296",
+ keywords = "Actin Cytoskeleton",
+ keywords = "Amino Acid Sequence",
+ keywords = "Animals",
+ keywords = "DNA, Complementary",
+ keywords = "Elasticity",
+ keywords = "Fibronectins",
+ keywords = "Humans",
+ keywords = "Immunoglobulins",
+ keywords = "Molecular Sequence Data",
+ keywords = "Muscle Contraction",
+ keywords = "Muscle Proteins",
+ keywords = "Muscle, Skeletal",
+ keywords = "Myocardium",
+ keywords = "Protein Kinases",
+ keywords = "Rabbits",
+ keywords = "Repetitive Sequences, Nucleic Acid",
+ keywords = "Sarcomeres",
+ abstract = "In addition to thick and thin filaments, vertebrate
+ striated muscle contains a third filament system formed by the
+ giant protein titin. Single titin molecules extend from Z discs to
+ M lines and are longer than 1 micrometer. The titin filament
+ contributes to muscle assembly and resting tension, but more
+ details are not known because of the large size of the
+ protein. The complete complementary DNA sequence of human cardiac
+ titin was determined. The 82-kilobase complementary DNA predicts a
+ 3-megadalton protein composed of 244 copies of immunoglobulin and
+ fibronectin type III (FN3) domains. The architecture of sequences
+ in the A band region of titin suggests why thick filament
+ structure is conserved among vertebrates. In the I band region,
+ comparison of titin sequences from muscles of different passive
+ tension identifies two elements that correlate with tissue
+ stiffness. This suggests that titin may act as two springs in
+ series. The differential expression of the springs provides a
+ molecular explanation for the diversity of sarcomere length and
+ resting tension in vertebrate striated muscles.",
+ ISSN = "0036-8075",
+ URL = "http://www.ncbi.nlm.nih.gov/pubmed/7569978",
+ language = "eng",
+}
+
@article { law03,
author = RLaw #" and "# GLiao #" and "# SHarper #" and "# GYang #" and "#
DSpeicher #" and "# DDischer,
URL = "http://www.ncbi.nlm.nih.gov/pubmed/16683841",
language = "eng",
}
+
+@article{ sandal09,
+ author = MSandal #" and "# FBenedetti #" and "# MBrucale #" and "#
+ AGomezCasado #" and "# BSamori,
+ title = "Hooke: an open software platform for force spectroscopy.",
+ journal = BIOINFO,
+ year = 2009,
+ month = jun,
+ day = 01,
+ address = "Department of Biochemistry, University of Bologna,
+ Bologna, Italy. massimo.sandal@unibo.it",
+ volume = 25,
+ number = 11,
+ pages = "1428--1430",
+ keywords = "Algorithms",
+ keywords = "Computational Biology",
+ keywords = "Internet",
+ keywords = "Microscopy, Atomic Force",
+ keywords = "Proteome",
+ keywords = "Proteomics",
+ keywords = "Software",
+ abstract = "SUMMARY: Hooke is an open source, extensible software
+ intended for analysis of atomic force microscope (AFM)-based
+ single molecule force spectroscopy (SMFS) data. We propose it as a
+ platform on which published and new algorithms for SMFS analysis
+ can be integrated in a standard, open fashion, as a general
+ solution to the current lack of a standard software for SMFS data
+ analysis. Specific features and support for file formats are coded
+ as independent plugins. Any user can code new plugins, extending
+ the software capabilities. Basic automated dataset filtering and
+ semi-automatic analysis facilities are included. AVAILABILITY:
+ Software and documentation are available at
+ (http://code.google.com/p/hooke). Hooke is a free software under
+ the GNU Lesser General Public License.",
+ ISSN = "1367-4811",
+ doi = "10.1093/bioinformatics/btp180",
+ URL = "http://www.ncbi.nlm.nih.gov/pubmed/19336443",
+ language = "eng",
+}