# ChangeLog for sci-chemistry/arp-warp-bin
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v 1.4 2010/03/20 18:07:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/ChangeLog,v 1.5 2010/04/22 20:03:33 jlec Exp $
+
+ 22 Apr 2010; Justin Lecher <jlec@gentoo.org> -files/7.0.1-setup.patch,
+ -files/7.0.1-source-ccp4-if-needed.patch, files/7.1-setup.patch,
+ arp-warp-bin-7.1.ebuild:
+ Fixes for Python ABIs, #316167
*arp-warp-bin-7.1 (20 Mar 2010)
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-AUX 7.0.1-setup.patch 6390 RMD160 64b0a1e4186294ed3a5dac58d073c25f706c39c6 SHA1 64417d3ff647f6d3d24deccfe3c212c0a6342116 SHA256 568059bea41429cc217c0246f2294cbf15d1a756f8bd2d7803c4c49bbc040b68
-AUX 7.0.1-source-ccp4-if-needed.patch 1252 RMD160 90856aafee9823ea45dbd5f3c2ab88bed9cfe77d SHA1 1d74549cd991bcbcf0687a2760cf71013489150f SHA256 33344b351ea53844fbfca00dc98fe1f5959a30b29f157f2f61f4be550e356c65
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+AUX 7.1-setup.patch 6277 RMD160 0113b56d57a00d2daa625c540282c2e047890abf SHA1 11774b738401dcda1badfaed5614c7e620160e8b SHA256 4d4ae302589270ee73fc41d6f8231ba64969e2828578528a1bc06ff926507d06
DIST arp_warp_7.1.tar.gz 195970881 RMD160 16698d4d81c1380f0b9f0aa012dba2689c1faec0 SHA1 bcd033194770153c6ce130e18676d6d3d3a44316 SHA256 e3496283eb1d63ce0ce84b32812ababe0ac266a270918f93f333d036ba36f8c3
-EBUILD arp-warp-bin-7.1.ebuild 2435 RMD160 dcea8c7750981adf645131fc89f0f2230e71d9d8 SHA1 baec472808d1bf301df87f587460341372a139c7 SHA256 0fe485b1335a74fc86f57fd6c8fed3c315e442cb746c9a163e0c7604fb29ef4d
-MISC ChangeLog 1189 RMD160 a4ed4cc08337e801fdd3c4231d90ce9b4f1f8086 SHA1 41945c96eb10917b0cdc0c82a09910bf3048841c SHA256 1476b6b27f62e24f941711ef6412b8bf9efde26af75cac6892b6978e4690e99d
+EBUILD arp-warp-bin-7.1.ebuild 2626 RMD160 e8182f81317430da5b89967c50c2a665f55e8c6a SHA1 2818dd62d436bb17fc9be6c46d01ab825b0e4523 SHA256 b4fa462cdbe23b9d77c80070c88f836036182651625298fd36642309536b9e37
+MISC ChangeLog 1390 RMD160 ebb2d1129473f1a0ab6ac6877b5c371b31213eed SHA1 f75d586d7c6c26a4d71b979a67975c8f59d16bbe SHA256 cd137ed3d5c750e1f459e5e4c059e1ba42e0f8f95e3b28ff80d18d447aefc0e1
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# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v 1.1 2010/03/20 18:07:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/arp-warp-bin/arp-warp-bin-7.1.ebuild,v 1.2 2010/04/22 20:03:33 jlec Exp $
EAPI="3"
elog "and place ${A} in ${DISTDIR}"
}
+pkg_setup() {
+ python_set_active_version 2
+}
+
src_prepare() {
epatch "${FILESDIR}"/${PV}-setup.patch
eprefixify "${S}"/share/arpwarp_setup_base.*
+ sed "s:PYVER:$(python_get_version):g" -i "${S}"/share/arpwarp_setup_base.*
+ python_convert_shebangs $(python_get_version) flex-wARP-src-354/*py
}
src_install(){
+++ /dev/null
-diff -Nu -Nu -uarN arp_warp_7.0.1.orig/share/arpwarp_setup_base.bash arp_warp_7.0.1/share/arpwarp_setup_base.bash
---- arp_warp_7.0.1.orig/share/arpwarp_setup_base.bash 2007-10-21 21:46:13.000000000 +0200
-+++ arp_warp_7.0.1/share/arpwarp_setup_base.bash 2008-04-06 13:33:05.000000000 +0200
-@@ -13,10 +13,10 @@
- identifier=${nameprocessor}'-'${namesystem}
- fi
- #
--arpwarphome="$1X"
-+arpwarphome="/opt/arp-warp-bin"
- #
- export warpbin=${arpwarphome}/bin/bin-${identifier}
--export warpdoc=${arpwarphome}/manual
-+export warpdoc=/usr/share/doc/arp-warp-bin-7.0.1/html/
- export PATH=${warpbin}:${PATH}
- #
- testccp='0'
-@@ -49,7 +49,7 @@
- fi
-
- ## 2. Complement by other potential places for python :
-- search_list="${search_list} /usr/local/bin/python /usr/bin/python"
-+ search_list="${search_list} /usr/bin/python"
- flex_wARP_python="/dev/null"
-
- ## 3. Pick up the first one of the list which seems reasonable :
-@@ -73,30 +73,6 @@
- export flex_wARP_bin=${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2}
- break
- fi
--# 3.c Otherwise, we should be able to create the byte-code using the python.
-- /bin/mkdir -p ${arpwarphome}/byte-code/python-${pythonvrs1}.${pythonvrs2} 1> /dev/null 2>&1
-- if [ 0 != $? ] ; then
-- /bin/mkdir -p ${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2} 1> /dev/null 2>&1
-- export flex_wARP_bin=${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2}
-- else
-- export flex_wARP_bin=${arpwarphome}/byte-code/python-${pythonvrs1}.${pythonvrs2}
-- fi
-- pushd ${flex_wARP_bin} 1> /dev/null 2>&1
-- if [ 0 != $? ] ; then
-- export flex_wARP_bin=${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2}
-- /bin/mkdir -p ${flex_wARP_bin} 1> /dev/null 2>&1
-- pushd ${flex_wARP_bin} 1> /dev/null 2>&1
-- fi
-- /bin/cp -p ${arpwarphome}/flex-wARP-src/*.py .
-- ${python_to_test} ./compile.py
-- /bin/rm -f *.py
-- popd 1> /dev/null 2>&1
-- if [ -e ${flex_wARP_bin}/CPyWARP.pyc ] ; then
-- export flex_wARP_python=${python_to_test}
-- echo "Created a new set of flex-wARP byte code in the directory :"
-- echo " '${flex_wARP_bin}'"
-- break
-- fi
- done
- ## 4. If nothing is available, print out a message.
- if [ "/dev/null" != ${flex_wARP_python} ] ; then
-@@ -107,6 +83,7 @@
- echo "WARNING while setting up ARP/wARP"
- echo "No valid 'python' command was found"
- echo "flex-warp ('ARP/wARP Expert System' in the GUI) will not be available."
-+ echo "Did you upgrade your python? Please run 'emerge sci-chemistry/arp-warp-bin!'"
- echo
- export flex_wARP_warpbin="Unavailable"
- export flex_wARP_cbin="Unavailable"
-@@ -115,17 +92,3 @@
- fi
- fi
-
--#
--# Setting up library path for SGI
--if [[ "${namesystem}" = 'IRIX64' || "${namesystem}" = 'IRIX' ]]; then
-- if test "$LD_LIBRARY_PATH"; then
-- export LD_LIBRARY_PATH=${warpbin}:${LD_LIBRARY_PATH}
-- else
-- export LD_LIBRARY_PATH=${warpbin}
-- fi
--fi
--# echo
--# echo 'ARP/wARP Version 7.0.1 has been setup'
--#
--
--
-diff -Nu -Nu -uarN arp_warp_7.0.1.orig/share/arpwarp_setup_base.csh arp_warp_7.0.1/share/arpwarp_setup_base.csh
---- arp_warp_7.0.1.orig/share/arpwarp_setup_base.csh 2007-10-21 21:46:13.000000000 +0200
-+++ arp_warp_7.0.1/share/arpwarp_setup_base.csh 2008-04-06 13:32:48.000000000 +0200
-@@ -13,10 +13,10 @@
- set identifier = ${nameprocessor}'-'${namesystem}
- endif
- #
--set arpwarphome = '$1X'
-+set arpwarphome = '/opt/arp-warp-bin'
- #
- setenv warpbin ${arpwarphome}/bin/bin-${identifier}
--setenv warpdoc ${arpwarphome}/manual
-+setenv warpdoc /usr/share/doc/arp-warp-bin-7.0.1/html/
- set path = ( $warpbin $path )
- #
- # Settings for python
-@@ -47,7 +47,7 @@
- endif
-
- ## 2. Complement by other potential places for python :
--set search_list = "${search_list} /usr/local/bin/python /usr/bin/python"
-+set search_list = "${search_list} /usr/bin/python"
- setenv flex_wARP_python "/dev/null"
-
- ## 3. Pick up the first one of the list which seems reasonable :
-@@ -71,30 +71,6 @@
- setenv flex_wARP_bin ${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2}
- break
- endif
--# 3.c Otherwise, we should be able to create the byte-code using the python.
-- /bin/mkdir -p ${arpwarphome}/byte-code/python-${pythonvrs1}.${pythonvrs2} >& /dev/null
-- if ( 0 != $status ) then
-- /bin/mkdir -p ${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2} >& /dev/null
-- setenv flex_wARP_bin ${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2}
-- else
-- setenv flex_wARP_bin ${arpwarphome}/byte-code/python-${pythonvrs1}.${pythonvrs2}
-- endif
-- pushd ${flex_wARP_bin} >& /dev/null
-- if ( 0 != $status ) then
-- setenv flex_wARP_bin ${HOME}/.flex-wARP/python-${pythonvrs1}.${pythonvrs2}
-- /bin/mkdir -p ${flex_wARP_bin} >& /dev/null
-- pushd ${flex_wARP_bin} >& /dev/null
-- endif
-- /bin/cp -p ${arpwarphome}/flex-wARP-src/*.py .
-- ${python_to_test} ./compile.py
-- /bin/rm -f *.py
-- popd >& /dev/null
-- if ( -e ${flex_wARP_bin}/CPyWARP.pyc ) then
-- setenv flex_wARP_python ${python_to_test}
-- echo "Created a new set of flex-wARP byte code in the directory :"
-- echo " '${flex_wARP_bin}'"
-- break
-- endif
- end
- ## 4. If nothing is available, print out a message.
- if ( "/dev/null" != ${flex_wARP_python} ) then
-@@ -105,22 +81,13 @@
- echo "WARNING while setting up ARP/wARP"
- echo "No valid 'python' command was found"
- echo "flex-warp ('ARP/wARP Expert System' in the GUI) will not be available."
-+ echo "Did you upgrade your python? Please run 'emerge sci-chemistry/arp-warp-bin!'"
- echo
- setenv flex_wARP_warpbin "Unavailable"
- setenv flex_wARP_cbin "Unavailable"
- setenv flex_wARP_python "/dev/null"
- setenv flex_wARP_bin "Unavailable"
- endif
--
--#
--# Setting up library path for SGI
--if ( ${namesystem} == 'IRIX64' || ${namesystem} == 'IRIX' ) then
-- if ( ${?LD_LIBRARY_PATH} ) then
-- setenv LD_LIBRARY_PATH ${warpbin}:${LD_LIBRARY_PATH}
-- else
-- setenv LD_LIBRARY_PATH ${warpbin}
-- endif
--endif
- #
- goto endsetup
- #
-@@ -132,7 +99,4 @@
- #
- endsetup:
- #
--#echo
--#echo 'ARP/wARP Version 7.0.1 has been setup'
--#
-
+++ /dev/null
---- share.orig/arpwarp_setup_base.bash 2008-08-03 16:50:03.000000000 -0700
-+++ share/arpwarp_setup_base.bash 2008-08-03 16:51:20.000000000 -0700
-@@ -23,11 +23,13 @@
- #
- # Checks for CBIN variable
- if [ "$CBIN" = "" ]; then
-- echo
-- echo "Cannot setup ARP/wARP"
-- echo 'Variable $CBIN is not defined'
-- echo "Please install CCP4 first"
-- testccp='1'
-+ if [ "$CBIN" = "" ]; then
-+ echo
-+ echo "Cannot setup ARP/wARP"
-+ echo 'Variable $CBIN is not defined'
-+ echo "Please install CCP4 first"
-+ testccp='1'
-+ fi
- fi
- if [ "$testccp" = '0' ]; then
- if [ ! -d $CBIN ]; then
---- share.orig/arpwarp_setup_base.csh 2008-08-03 16:50:06.000000000 -0700
-+++ share/arpwarp_setup_base.csh 2008-08-03 16:52:03.000000000 -0700
-@@ -22,11 +22,13 @@
- # Settings for python
- # Checks for CBIN variable
- if ( ! $?CBIN ) then
-- echo
-- echo 'Cannot setup ARP/wARP'
-- echo 'Variable $CBIN is not defined'
-- echo 'Please install CCP4 first'
-- goto errorsetup
-+ if ( ! $?CBIN ) then
-+ echo
-+ echo 'Cannot setup ARP/wARP'
-+ echo 'Variable $CBIN is not defined'
-+ echo 'Please install CCP4 first'
-+ goto errorsetup
-+ endif
- endif
- if ( ! -d $CBIN ) then
- echo
## 2. Complement by other potential places for python :
- search_list="${search_list} /usr/local/bin/python /usr/bin/python"
-+ search_list="${search_list} @GENTOO_PORTAGE_EPREFIX@/usr/bin/python"
++ search_list="${search_list} @GENTOO_PORTAGE_EPREFIX@/usr/bin/pythonPYVER"
flex_wARP_python="/dev/null"
## 3. Pick up the first one of the list which seems reasonable :
## 2. Complement by other potential places for python :
-set search_list = "${search_list} /usr/local/bin/python /usr/bin/python"
-+set search_list = "${search_list} @GENTOO_PORTAGE_EPREFIX@/usr/bin/python"
++set search_list = "${search_list} @GENTOO_PORTAGE_EPREFIX@/usr/bin/pythonPYVER"
setenv flex_wARP_python "/dev/null"
## 3. Pick up the first one of the list which seems reasonable :
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