figures/labview-comparision: Data and figures comparing control stacks

This should be automated, but I don't have time now.

diff --git a/src/figures/labview-comparison/README b/src/figures/labview-comparison/README
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+Using my compare-unfold.py script from my blog:
+
+  $ git clone git://tremily.us/blog.git
+  $ ls blog/posts/Comparing_velocity_clamp_experiments/compare-unfold.py
+
+  $ compare-unfold.py -o full.png gyang/2012-10-01-unfold/ wking/unfold/
+  $ compare-unfold.py --contact-slope -o contact-slope.pdf gyang/2012-10-01-unfold/ wking/unfold/
+  $ compare-unfold.py --non-contact-noise -o non-contact-noise.png gyang/2012-10-01-unfold/ wking/unfold/
+
+I prefer the vector-format PDF, but for size regions it's better to
+use PNGs when you're plotting tons of points.
+
+The single-*.png images come from manual zooms and saves of:
+
+  $ compare-unfold.py --single gyang/2012-10-01-unfold/ wking/unfold/
+
+This should be automated, but I haven't had time yet.

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diff --git a/src/figures/labview-comparison/gyang/2012-10-01-unfold/Aug30Vz_0 b/src/figures/labview-comparison/gyang/2012-10-01-unfold/Aug30Vz_0
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diff --git a/src/figures/labview-comparison/gyang/2012-10-01-unfold/Aug30_0.ibw b/src/figures/labview-comparison/gyang/2012-10-01-unfold/Aug30_0.ibw
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diff --git a/src/figures/labview-comparison/wking/2012-10-01-calibration-approach-2.png b/src/figures/labview-comparison/wking/2012-10-01-calibration-approach-2.png
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diff --git a/src/figures/labview-comparison/wking/2012-10-01-notes b/src/figures/labview-comparison/wking/2012-10-01-notes
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+Setup with DI water on an old gold coverslip with a new cantilever
+(Asylum Research; Olympus TR400PSA; lot 860135, date 2009-01-20, chip
+32/35).
+
+The deflection signal is jumpy.  After flushing in the water, I only
+tweaked the photodiode position twice, but there are a number of
+discrete jumps in the slow-bend data.
+
+
+First calibration run without the plastic bell.  It may be noisy
+because there are a couple of compressors running in the room, and
+I've left the microscope TV on (but with the microcope light off).
+
+First calibration had trouble finding the surface.  Repeat.
+
+Third calibration with the TV off.
+
+Fourth calibration with TV off and the plastic bell, but with the
+syringe on the short hose, the bell doesn't seal very well.
+
+Run some pulls with my unfold.py.
+
+Quit and run slow_bend.  After ~20 samples, pull the thermocouple out
+of the cell into the air.  After another ~20 samples, wipe dry with a
+Kimwipe.
+
+Switch to Marisa's setup (using my DAQ card and not touching the
+multimode).

diff --git a/src/figures/labview-comparison/wking/2012-10-01T16-34-51-calibcant-data.h5 b/src/figures/labview-comparison/wking/2012-10-01T16-34-51-calibcant-data.h5
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diff --git a/src/figures/labview-comparison/wking/2012-10-01_16-22-39 b/src/figures/labview-comparison/wking/2012-10-01_16-22-39
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+#time (second) ambient temperature (bit)       ambient temperature (C) temperature (bit)       temperature (C) chan 0 (bit)    chan 0 (volt)
+2.5034e-05     13520   24.8333 13694   26.17   33848   0.329747
+5.76007        13521   24.8333 13694   26.19   33853   0.331273
+10.13  13522   24.7778 13694   26.19   33807   0.317235
+14.762 13522   24.8333 13693   26.18   33766   0.304723
+19.1258        13522   24.7778 13695   26.22   33773   0.306859
+23.6675        13521   24.8333 13696   26.24   33682   0.279088
+28.0803        13521   24.8333 13695   26.25   33612   0.257725
+32.368 13521   24.8333 13696   26.24   33280   0.156405
+36.6859        13521   24.8333 13694   26.24   33166   0.121614
+40.9559        13521   24.8333 13695   26.18   65076   9.85992
+45.2599        13521   24.8333 13696   26.22   32768   0.00015259
+49.4807        13520   24.8333 13695   26.22   33176   0.124666
+53.6699        13521   24.8333 13695   26.24   33926   0.353552
+57.8841        13521   24.8333 13697   26.25   33955   0.362402
+62.2721        13520   24.8333 13698   26.25   34174   0.429236
+66.641 13520   24.8333 13698   26.24   34430   0.507362
+71.0221        13520   24.8333 13697   26.27   34866   0.640421
+75.2234        13521   24.7778 13697   26.22   35204   0.743572
+79.5544        13521   24.8333 13696   26.25   35487   0.829938
+83.8866        13520   24.8333 13697   26.24   35893   0.953841
+88.0752        13521   24.8333 13697   26.27   36221   1.05394
+92.2957        13521   24.8333 13695   26.24   36539   1.15099
+96.5815        13521   24.8333 13697   26.24   39149   1.94751
+100.831        13520   24.8333 13698   26.25   57238   7.46792
+105.059        13520   24.8333 13696   26.24   57272   7.47829
+109.289        13520   24.8333 13696   26.25   38183   1.6527
+113.498        13521   24.8333 13695   26.25   30679   -0.637369
+117.786        13520   24.8333 13697   26.27   32059   -0.21622
+122.156        13520   24.8333 13695   26.25   32349   -0.127718
+126.407        13522   24.7778 13699   26.25   32765   -0.000762951
+130.623        13520   24.8333 13698   26.24   32932   0.0502022
+134.899        13519   24.8333 13696   26.29   33155   0.118257
+139.097        13520   24.8333 13700   26.25   33477   0.216526
+143.314        13520   24.8333 13696   26.29   33749   0.299535
+147.524        13520   24.8333 13697   26.25   33949   0.360571
+151.687        13520   24.8333 13698   26.24   34283   0.462501
+156.084        13519   24.8333 13698   26.24   34358   0.485389
+160.396        13519   24.8333 13700   26.29   34854   0.636759
+164.753        13520   24.8333 13700   26.29   34813   0.624247
+169.002        13519   24.8333 13698   26.31   35010   0.684367
+173.223        13519   24.8333 13698   26.33   35293   0.770733
+177.556        13519   24.8333 13699   26.27   35570   0.855268
+181.87 13520   24.8333 13699   26.29   34260   0.455482
+186.486        13519   24.8333 13700   26.27   34407   0.500343
+190.93 13519   24.8333 13698   26.31   34558   0.546426
+195.638        13519   24.8333 13699   26.29   34826   0.628214
+200.129        13518   24.8333 13698   26.27   34918   0.656291
+204.432        13519   24.8333 13700   26.31   35229   0.751202
+208.751        13519   24.8333 13699   26.29   35287   0.768902
+213.009        13519   24.8333 13700   26.31   35557   0.851301
+217.214        13519   24.8333 13698   26.33   35595   0.862898
+221.4  13518   24.8333 13699   26.33   36043   0.999619
+225.639        13519   24.8333 13700   26.29   36398   1.10796
+229.903        13519   24.8333 13699   26.31   36674   1.19219
+234.121        13518   24.8333 13700   26.29   36862   1.24956
+238.214        13519   24.8333 13701   26.29   37064   1.31121
+242.343        13518   24.8333 13702   26.31   37194   1.35088
+246.617        13519   24.8333 13700   26.29   37232   1.36248
+250.782        13518   24.8333 13700   26.31   37679   1.49889
+254.978        13519   24.8333 13700   26.27   37713   1.50927
+259.207        13518   24.8333 13699   26.36   38058   1.61456
+263.32 13518   24.8333 13701   26.33   38103   1.62829
+267.689        13518   24.8333 13700   26.31   38424   1.72625
+271.895        13518   24.8333 13700   26.31   38591   1.77722
+276.142        13518   24.8333 13701   26.29   38653   1.79614
+280.343        13518   24.8333 13700   26.4    38976   1.89471
+284.639        13518   24.8333 13700   26.31   39071   1.9237
+288.991        13517   24.8333 13699   26.36   39438   2.03571
+293.256        13518   24.8333 13700   26.31   39672   2.10712
+297.493        13517   24.8889 13700   26.31   33146   0.115511
+301.738        13517   24.8889 13701   26.29   32888   0.0367742
+306.071        13517   24.8333 13700   26.29   33186   0.127718
+310.382        13518   24.8333 13701   26.4    33292   0.160067
+314.6  13517   24.8889 13700   26.33   33211   0.135348
+318.878        13517   24.8333 13701   26.31   33242   0.144808
+323.178        13518   24.8333 13699   26.38   33476   0.21622
+327.455        13517   24.8889 13701   26.34   33408   0.195468
+331.688        13518   24.8333 13702   26.38   33186   0.127718
+335.928        13517   24.8333 13703   26.35   31437   -0.406043
+340.229        13517   24.8889 13700   26.38   31499   -0.387121
+344.601        13517   24.8889 13701   26.29   31536   -0.37583
+348.857        13518   24.8889 13702   26.4    31829   -0.286412
+353.208        13517   24.8889 13701   26.4    31917   -0.259556
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diff --git a/src/figures/labview-comparison/wking/2012-10-01_17-04-53 b/src/figures/labview-comparison/wking/2012-10-01_17-04-53
new file mode 100644 (file)
index 0000000..36f3663
--- /dev/null
+++ b/src/figures/labview-comparison/wking/2012-10-01_17-04-53
@@ -0,0 +1,74 @@
+#time (second) ambient temperature (bit)       ambient temperature (C) temperature (bit)       temperature (C) chan 0 (bit)    chan 0 (volt)
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+4.13506        13504   25.1111 13774   28.02   35927   0.964218
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+10.5299        13505   25.1111 13775   28.04   37633   1.48486
+13.7594        13504   25.1111 13776   28.06   36200   1.04753
+17.0175        13505   25.1111 13776   28.06   30390   -0.725566
+20.2315        13505   25.1111 13778   28.06   30352   -0.737163
+23.3884        13506   25.1111 13776   28.06   30327   -0.744793
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+29.8066        13504   25.1111 13776   28.02   30391   -0.725261
+33.0056        13504   25.1111 13776   28.1    30434   -0.712139
+36.1923        13504   25.1111 13778   28.06   30368   -0.73228
+39.3755        13504   25.1111 13775   28.04   30318   -0.747539
+42.5755        13504   25.1111 13779   28.06   30297   -0.753948
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+58.615 13504   25.1111 13777   28.08   30427   -0.714275
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+71.3815        13504   25.1111 13210   17.01   30419   -0.716716
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+231.311        13502   25.1111 13415   21.17   32105   -0.202182

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