unpack-trees: mark new entries skip-worktree appropriately

unpack-trees: mark new entries skip-worktree appropriately

Sparse checkout narrows worktree down based on the skip-worktree bit
before and after $GIT_DIR/info/sparse-checkout application. If it does
not have that bit before but does after, a narrow is detected and the
file will be removed from worktree.

New files added by merge, however, does not have skip-worktree bit. If
those files appear to be outside checkout area, the same rule applies:
the file gets removed from worktree even though they don't exist in
worktree.

Just pretend they have skip-worktree before in that case, so the rule
is ignored.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Reviewed-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>