Merged sawsim paper.
authorW. Trevor King <wking@drexel.edu>
Thu, 14 Jan 2010 02:20:44 +0000 (21:20 -0500)
committerW. Trevor King <wking@drexel.edu>
Thu, 14 Jan 2010 02:20:44 +0000 (21:20 -0500)
commit1e5a708c2c8b4fd75075d60a37beeef9025f49e1
tree160cafe52cd9439fd0b8c86ddfeee360674cdce5
parent80317b78d42adc4bca8159697c7b654730376ad9
Merged sawsim paper.
216 files changed:
tex/Makefile
tex/src/Makefile
tex/src/cantilever_calib/cantilever_calib.tex
tex/src/local_cmmds.tex
tex/src/packages.tex
tex/src/packages/Makefile [new file with mode: 0644]
tex/src/packages/cleveref.sty [new file with mode: 0644]
tex/src/packages/fr-subfig.sty [new file with mode: 0644]
tex/src/packages/lineno.sty [new file with mode: 0644]
tex/src/root.tex
tex/src/sawsim/Makefile [new file with mode: 0644]
tex/src/sawsim/expt-sawtooth.pdf [new symlink]
tex/src/sawsim/figures/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/README [new file with mode: 0644]
tex/src/sawsim/figures/expt-sawtooth/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/expt-sawtooth/NOTES [new file with mode: 0644]
tex/src/sawsim/figures/expt-sawtooth/expt.d [new file with mode: 0644]
tex/src/sawsim/figures/expt-sawtooth/plot.gp [new file with mode: 0644]
tex/src/sawsim/figures/expt-sawtooth/sawmodel.xml [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/fig3.ppm [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/fig3a.clicks [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/fig3a.data [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/fig3a.data.loglog [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/fig3a.summary [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/fit.log [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/king_expt.data [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/king_extrap.data [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/king_sim-566.data [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Best_2002_detailed_unfolding_pathway/loglog_to_normal.py [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/data [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/extract_fit_valley.py [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/fit.log [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/fit_valley.data [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/king_vs_best.gp [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/king_vs_best.png [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/means [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/means.gp [new file with mode: 0644]
tex/src/sawsim/figures/fit-space/plot.gp [new file with mode: 0644]
tex/src/sawsim/figures/folded-model-hists/fig.pdf [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-0.001 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-0.01 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-0.05 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-0.1 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-0.5 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-1 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/data-10 [new file with mode: 0644]
tex/src/sawsim/figures/kappa-sawteeth/plot.gp [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/hist3i.hist [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/hist3i.note [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/hist3ii.hist [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/hist3ii.note [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/hist3iii.hist [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/hist3iii.note [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.avg-12 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.avg-16 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.avg-8 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-12.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-12.10 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-12.11 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-12.12 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-12.2 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.d-16.1 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.d-16.6 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-16.7 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-16.8 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-16.9 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-4.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-4.2 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-4.3 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-4.4 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-8.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-8.2 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-8.3 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.d-8.7 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.d-8.8 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.10 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.11 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.12 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.2 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.3 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.4 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.5 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.6 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.hist-12.8 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-12.9 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-16.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-16.10 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.hist-16.12 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-16.13 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.hist-16.3 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-16.4 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-16.5 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.hist-16.8 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-16.9 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-4.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-4.2 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-4.3 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-4.4 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-8.1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-8.2 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-8.3 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/order.hist-8.4 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/order.hist-8.8 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/std-dev.12 [new file with mode: 0644]
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tex/src/sawsim/figures/order-dep/data/table_1 [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/data/table_1.sd [new file with mode: 0644]
tex/src/sawsim/figures/order-dep/plot.gp [new file with mode: 0644]
tex/src/sawsim/figures/params.sh [new file with mode: 0644]
tex/src/sawsim/figures/schematic/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/schematic/unfolding.asy [new file with mode: 0644]
tex/src/sawsim/figures/sim-hist/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/sim-hist/hist.d [new file with mode: 0644]
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tex/src/sawsim/figures/sim-hist/plot.gp [new file with mode: 0644]
tex/src/sawsim/figures/sim-sawtooth/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/sim-sawtooth/fig1.d [new file with mode: 0644]
tex/src/sawsim/figures/sim-sawtooth/fig2.d [new file with mode: 0644]
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tex/src/sawsim/figures/sim-sawtooth/plot.gp [new file with mode: 0644]
tex/src/sawsim/figures/v-dep/Makefile [new file with mode: 0644]
tex/src/sawsim/figures/v-dep/fig4i-1e-5_0.225e-9.hist [new file with mode: 0644]
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tex/src/sawsim/figures/v-dep/v_dep-1e-5_0.225e-9/v_dep_notes [new file with mode: 0644]
tex/src/sawsim/figures/v-dep/v_dep-5e-5_0.1e-9/data_1e-5 [new file with mode: 0644]
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tex/src/sawsim/fit-space.pdf [new symlink]
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tex/src/sawsim/schematic.pdf [new symlink]
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tex/src/wtk.bib