src/root.tex

   1 % Copyright (C)  2010  W.Trevor King <wking@drexel.edu>
   2 % Permission is granted to copy, distribute, and/or modify this document
   3 % under the terms of the Creative Commons Attribution-ShareAlike License
   4 % Version 3.0.
   5 %
   6 % You should have revieved a copy of the Creative Commons
   7 % Attribution-ShareAlike License along with this program (COPYING-CC);
   8 % if not, visit
   9 %   http://creativecommons.org/licenses/by-sa/3.0/legalcode
  10
  11 \documentclass[%
  12   subfig,%
  13   indenttoc,%
  14 %  final%
  15   draft%
  16 ]{drexel-thesis}
  17 % See drexel-thesis.pdf for more options.
  18
  19 %\includeonly{%
  20 %  cantilever/main,%
  21 %  temperature/main%
  22 %  cantilever-calib/main
  23 %}
  24
  25 \author{William Trevor King}
  26 \title{Open source single molecule force spectroscopy}
  27 \DUTmonth{May}
  28 \DUTyear{2013}
  29 \degree{Doctor of Philosophy}
  30 \advisor{Guoliang Yang, Ph.D.}
  31 \advisor{Louis Cruz Cruz, Ph.D.}
  32 \copyrighttext{\copyrighttextCCBYSA}
  33
  34 \input{packages}
  35
  36 \begin{document}
  37
  38 % Work-directory for Asymptote files (no spaces):
  39 \def\asydir{figures/scratch}
  40 \begin{asydef}
  41 // Global Asymptote definitions go here.
  42 //texpreamble("\documentclass{drexel-thesis}");
  43 //usepackage("packages");
  44 defaultpen(fontsize(10));  // match drexel-thesis's default 10pt font size
  45 \end{asydef}
  46
  47
  48 \begin{preamble}
  49
  50 %\include{blurb/dedications}
  51 %\include{blurb/acknowledgments}
  52
  53 \tableofcontents
  54 \listoftables
  55 \listoffigures
  56
  57 \include{blurb/abstract}
  58
  59 \end{preamble}
  60 \iffinal{}{\linenumbers}
  61
  62 \begin{thesis}
  63 \pdfbookmark[-1]{Mainmatter}{Mainmatter}
  64 \include{introduction/main}
  65 \include{apparatus/main}
  66 \include{sawsim/main}
  67 \include{pyafm/main}
  68 \include{calibcant/main}
  69 %\include{temperature/main}
  70 %\include{cantilever/main}
  71 \include{future/main}
  72 \end{thesis}
  73
  74 \bibliography{%
  75   apparatus/main,%
  76 %  sawsim/main,% currently empty
  77   pyafm/main,%
  78   calibcant/main,%
  79   packaging/main,%
  80   figures/main,%
  81   root}
  82
  83 \appendix
  84 \include{cantilever-calib/main}
  85 \include{viscocity/main}
  86
  87 \printnomenclature
  88 % avoid index's second column overlapping the nomenclature space.
  89 \iffinal{}{\pagebreak}
  90 \printindex
  91
  92 %\include{blurb/vita}
  93
  94 \end{document}