sci-chemistry/mustang/mustang-3.2.2.ebuild

   1 # Copyright 1999-2015 Gentoo Foundation
   2 # Distributed under the terms of the GNU General Public License v2
   3
   4 EAPI=5
   5
   6 inherit eutils toolchain-funcs
   7
   8 MY_PN="MUSTANG"
   9 SRC_P="${PN}_v${PV}"
  10 MY_P="${MY_PN}_v${PV}"
  11
  12 DESCRIPTION="MUltiple STructural AligNment AlGorithm"
  13 HOMEPAGE="http://www.csse.monash.edu.au/~karun/Site/mustang.html"
  14 SRC_URI="http://www.csse.monash.edu.au/~karun/${PN}/${PN}_v${PV}.tgz"
  15
  16 LICENSE="BSD"
  17 SLOT="0"
  18 KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
  19 IUSE=""
  20
  21 S="${WORKDIR}/${MY_P}"
  22
  23 src_prepare() {
  24         epatch "${FILESDIR}"/${PN}-3.2.1-gcc-4.7.patch
  25         sed -e 's:3.2.1:3.2.2:g' -i Makefile || die
  26 }
  27
  28 src_compile() {
  29         emake \
  30                 CPP=$(tc-getCXX) \
  31                 CPPFLAGS="${CXXFLAGS}" \
  32                 LDFLAGS="${LDFLAGS}"
  33 }
  34
  35 src_test() {
  36         ./bin/${P} -f ./data/test/test_zf-CCHH || die
  37 }
  38
  39 src_install() {
  40         newbin bin/${P} ${PN}
  41         doman man/${PN}.1
  42         dodoc README
  43 }
  44
  45 pkg_postinst() {
  46         elog "If you use this program for an academic paper, please cite:"
  47         elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk"
  48         elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006"
  49 }