sci-biology/exonerate/exonerate-2.2.0-r2.ebuild

   1 # Copyright 1999-2019 Gentoo Authors
   2 # Distributed under the terms of the GNU General Public License v2
   3
   4 EAPI=6
   5
   6 inherit autotools toolchain-funcs
   7
   8 DESCRIPTION="Generic tool for pairwise sequence comparison"
   9 HOMEPAGE="https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate"
  10 SRC_URI="http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/${P}.tar.gz"
  11
  12 LICENSE="GPL-3"
  13 SLOT="0"
  14 KEYWORDS="~amd64 ~x86 ~ppc-macos ~x64-macos"
  15 IUSE="test threads utils"
  16 RESTRICT="!test? ( test )"
  17 REQUIRED_USE="test? ( utils )"
  18
  19 DEPEND="dev-libs/glib:2"
  20 RDEPEND="${DEPEND}"
  21
  22 PATCHES=( "${FILESDIR}"/${P}-asneeded.patch )
  23
  24 src_prepare() {
  25         default
  26         sed \
  27                 -e 's: -O3 -finline-functions::g' \
  28                 -i configure.in || die
  29         mv configure.{in,ac} || die
  30
  31         eautoreconf
  32 }
  33
  34 src_configure() {
  35         tc-export CC
  36
  37         econf \
  38                 --enable-glib2 \
  39                 --enable-largefile \
  40                 $(use_enable utils utilities) \
  41                 $(use_enable threads pthreads)
  42 }
  43
  44 src_install() {
  45         default
  46
  47         doman doc/man/man1/*.1
  48 }