sci-biology/clustalw-mpi/clustalw-mpi-0.13-r2.ebuild

   1 # Copyright 1999-2017 Gentoo Foundation
   2 # Distributed under the terms of the GNU General Public License v2
   3
   4 EAPI=6
   5
   6 inherit toolchain-funcs
   7
   8 DESCRIPTION="An MPI implemention of the ClustalW general purpose multiple alignment algorithm"
   9 HOMEPAGE="http://www.bii.a-star.edu.sg/achievements/applications/clustalw/index.php"
  10 SRC_URI="http://web.bii.a-star.edu.sg/~kuobin/${PN}/${P}.tar.gz"
  11
  12 LICENSE="public-domain"
  13 SLOT="0"
  14 KEYWORDS="~amd64 ~x86"
  15 IUSE="mpi_njtree static_pairalign"
  16
  17 DEPEND="virtual/mpi"
  18 RDEPEND="${DEPEND}"
  19
  20 PATCHES=( "${FILESDIR}"/${PV}-gentoo.patch )
  21
  22 src_prepare() {
  23         default
  24
  25         if use mpi_njtree; then
  26                 sed -e "s/TREES_FLAG/#TREES_FLAG/" -i Makefile || \
  27                         die "Failed to configure MPI code for NJ trees"
  28         fi
  29
  30         if use static_pairalign; then
  31                 sed -e "s/DDYNAMIC_SCHEDULING/DSTATIC_SCHEDULING/" -i Makefile || \
  32                         die "Failed to configure static scheduling for pair alignments"
  33         fi
  34 }
  35
  36 src_install() {
  37         dobin ${PN}
  38         newdoc README.${PN} README
  39 }